https://catalamarti.r-universe.devRecent package updates in catalamartiR-universehttps://github.com/catalamarti.pnghttps://catalamarti.r-universe.devWed, 21 Oct 2026 16:37:46 GMTmarti.catalasabate@ndorms.ox.ac.uk (Martí Català)Provides tools to derive standardised, reproducible patient-level indices and covariates from Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) databases. Functions calculate comorbidity and frailty scores, including the Charlson Comorbidity Index, Electronic Frailty Index, and Hospital Frailty Risk Score, as well as body mass index, polypharmacy, ethnicity, location, and socioeconomic status measures.https://github.com/r-universe/ohdsi/actions/runs/39645464632Wed, 21 Oct 2026 16:37:46 GMTOmopIndices0.1.0.900successhttps://ohdsi.r-universe.devhttps://github.com/ohdsi/omopindicesmarti.catalasabate@ndorms.ox.ac.uk (Martí Català)Visualise results obtained from analysing data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model using 'shiny' applications.https://github.com/r-universe/ohdsi/actions/runs/36916292214Thu, 01 Oct 2026 14:12:34 GMTOmopViewer0.7.0successhttps://ohdsi.r-universe.devhttps://github.com/ohdsi/omopviewerdynamic_app.Rmddynamic_app.htmlDynamic app2025-07-08 22:58:582025-07-08 22:58:58edit_static_content.Rmdedit_static_content.htmlCustomise your static shiny2025-04-07 20:58:332025-07-08 22:58:58export_static_app.Rmdexport_static_app.htmlCreate a static shiny app2025-04-07 20:58:332025-07-08 22:58:58marti.catalasabate@ndorms.ox.ac.uk (Martí Català)Identify the characteristics of patients in data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model.https://github.com/r-universe/darwin-eu/actions/runs/39769615544Tue, 22 Sep 2026 13:40:29 GMTPatientProfiles1.6.1successhttps://darwin-eu.r-universe.devhttps://github.com/darwin-eu/patientprofilescohort-intersect.Rmdcohort-intersect.htmlAdding cohort intersections2024-04-09 11:54:262026-09-09 00:36:10concept-intersect.Rmdconcept-intersect.htmlAdding concept intersections2024-04-09 11:54:262026-09-09 00:36:10demographics.rmddemographics.htmlAdding patient demographics2024-04-09 11:54:262026-09-09 00:36:10event.rmdevent.htmlAdding first or last events2026-08-05 13:11:562026-09-09 00:36:10summarise.Rmdsummarise.htmlSummarise result2024-04-09 11:54:262026-09-09 00:36:10table-intersect.Rmdtable-intersect.htmlAdding table intersections2024-04-09 11:54:262026-09-09 00:36:10marti.catalasabate@ndorms.ox.ac.uk (Martí Català)Provides definitions of core classes and methods used by analytic pipelines that query the OMOP (Observational Medical Outcomes Partnership) common data model.https://github.com/r-universe/darwin-eu/actions/runs/37767839827Tue, 08 Sep 2026 16:12:25 GMTomopgenerics1.4.2successhttps://darwin-eu.r-universe.devhttps://github.com/darwin-eu/omopgenericscdm_reference.Rmdcdm_reference.htmlThe cdm reference2024-07-04 17:21:262026-06-18 08:05:36cohorts.Rmdcohorts.htmlCohort tables2024-07-04 17:21:262026-06-18 08:05:36codelists.Rmdcodelists.htmlConcept sets2024-07-04 17:21:262026-06-18 08:05:36expanding_omopgenerics.Rmdexpanding_omopgenerics.htmlExpanding omopgenerics2025-07-15 18:46:362026-09-08 16:12:25logging.Rmdlogging.htmlLogging with omopgenerics2025-05-21 17:35:162026-06-18 08:05:36reexport.Rmdreexport.htmlRe-exporting functions from omopgenerics2024-02-16 16:25:522026-06-18 08:05:36summarised_result.Rmdsummarised_result.htmlA summarised result2024-07-04 17:21:262026-06-18 08:05:36suppression.Rmdsuppression.htmlSuppression of a summarised_result object2025-09-19 10:49:412026-06-18 08:05:36marti.catalasabate@ndorms.ox.ac.uk (Martí Català)Summarise patient-level drug utilisation cohorts using data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. New users and prevalent users cohorts can be generated and their characteristics, indication and drug use summarised.https://github.com/r-universe/darwin-eu/actions/runs/37767934889Mon, 24 Aug 2026 09:26:35 GMTDrugUtilisation1.3.1successhttps://darwin-eu.r-universe.devhttps://github.com/darwin-eu/drugutilisationdrug_utilisation.Rmddrug_utilisation.htmlGetting drug utilisation related information of subjects in a cohort2024-07-17 10:04:422025-11-19 22:33:29create_cohorts.Rmdcreate_cohorts.htmlCreating drug cohorts2024-07-16 23:32:152025-11-19 22:33:29marti.catalasabate@ndorms.ox.ac.uk (Martí Català)Summarise and visualise the characteristics of patients in data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model (CDM).https://github.com/r-universe/darwin-eu/actions/runs/37767974129Fri, 26 Jun 2026 09:27:57 GMTCohortCharacteristics1.1.3successhttps://darwin-eu.r-universe.devhttps://github.com/darwin-eu/cohortcharacteristicssummarise_characteristics.Rmdsummarise_characteristics.htmlSummarise patient characteristics2024-09-28 17:25:132025-11-19 19:35:53summarise_cohort_overlap.Rmdsummarise_cohort_overlap.htmlSummarise cohort overlap2024-09-28 17:25:132025-10-13 23:00:42summarise_cohort_timing.Rmdsummarise_cohort_timing.htmlSummarise cohort timing2024-09-28 17:25:132025-10-13 23:00:42summarise_large_scale_characteristics.Rmdsummarise_large_scale_characteristics.htmlSummarise large scale characteristics2024-09-28 17:25:132025-10-13 23:00:42marti.catalasabate@ndorms.ox.ac.uk (Martí Català)Provides functionality to construct standardised tables from health care data formatted according to the Observational Medical Outcomes Partnership (OMOP) Common Data Model. The package includes tools to build key tables such as observation period and drug era, among others.https://github.com/r-universe/ohdsi/actions/runs/38242864386Wed, 06 May 2026 17:21:45 GMTOmopConstructor0.3.0successhttps://ohdsi.r-universe.devhttps://github.com/ohdsi/omopconstructorachilles.Rmdachilles.htmlAchilles tables2026-04-06 18:29:012026-04-06 18:29:01buildObservationPeriod.RmdbuildObservationPeriod.htmlGenerating the Observation Period Table2025-09-22 16:32:352025-09-22 19:23:07